PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82003.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 177aa    MW: 19970.3 Da    PI: 8.8526
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.3e-121361555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                 + +E++RR +++s  ++L +l+P+     sk  ls  + Le+A+eYIk+Lq
  RWR82003.1 13 RKTIEKNRRINMKSLCFKLASLVPSH---FSKMaLSIPDKLEQATEYIKNLQ 61
                5789*********************7...45555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MKSSQTSSSK LERKTIEKNR RINMKSLCFK LASLVPSHFS KMALSIPDKL EQATEYIKNL  60
QENIEALKKK RDLPVHIVET SKDVTDGMMI GFSLPVIEVR ESDSVVEVVL VTELKKNFML  120
CNVISIIEEE GAQVVNASFS CAADKVFHII HSQVTSPRVG FESARALERL KELVYRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-25bHLH family protein