PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82105.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 419aa MW: 46422 Da PI: 8.6555

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.7	2.4e-06	191	213	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +CpdCg+ Fs +++L+ H+ + H RWR82105.1 191 PCPDCGEIFSKPESLELHQTVrH 213 7******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MPHKEGSGYP ATFPIKTIFS LSHDFLAAHL ISSPMAETNN PRKSNNISHQ NQNHHPPKTK 60 KKPPSWAAVR TLFTCKHHQH TAECNKQCKR IGCSGSLCLL RDNSKVMHKP EAASPEVCKK 120 WISVGACNSS DRSMKARVDE INEAIASSSS VGGSSRRMQL RRLSVCYECD MVVNPSNQLS 180 RDSSLRTSVC PCPDCGEIFS KPESLELHQT VRHAVSELDP EDSSRNIVEI IFQSSWLKKQ 240 EPVCKIDRIL KVHNSQKTIT KFEDYRDSIK AKANKLPKKY PRCIADGNEL LRFHCTTFTC 300 SLGINGSSNL CNSIPNCSVC NIIRNGFKTD GLGGICTTAT SGKAHDKAQI PSEDEKRAML 360 VCRVIAGRVK KNQDCAEEFD SVASPGGIYS NSDELCVLNS RAILPCFVVI YRDFNAFLS

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MPHKEGSGYP ATFPIKTIFS LSHDFLAAHL ISSPMAETNN PRKSNNISHQ NQNHHPPKTK  60
KKPPSWAAVR TLFTCKHHQH TAECNKQCKR IGCSGSLCLL RDNSKVMHKP EAASPEVCKK  120
WISVGACNSS DRSMKARVDE INEAIASSSS VGGSSRRMQL RRLSVCYECD MVVNPSNQLS  180
RDSSLRTSVC PCPDCGEIFS KPESLELHQT VRHAVSELDP EDSSRNIVEI IFQSSWLKKQ  240
EPVCKIDRIL KVHNSQKTIT KFEDYRDSIK AKANKLPKKY PRCIADGNEL LRFHCTTFTC  300
SLGINGSSNL CNSIPNCSVC NIIRNGFKTD GLGGICTTAT SGKAHDKAQI PSEDEKRAML  360
VCRVIAGRVK KNQDCAEEFD SVASPGGIYS NSDELCVLNS RAILPCFVVI YRDFNAFLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-96	C2H2 family protein