PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82226.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 291aa MW: 33771.1 Da PI: 7.8116

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58	2.1e-18	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W+++ar+ g++Rt+k+c++rw++yl RWR82226.1 19 RGPWTLEEDTLLIHYIACHGEGRWNLVARCSGLKRTGKSCRLRWLNYL 66 89********************************************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++ RWR82226.1 72 RGNLTPEEQLVILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 115 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MSTVTKKGCN PQEDIELRRG PWTLEEDTLL IHYIACHGEG RWNLVARCSG LKRTGKSCRL 60 RWLNYLKPDV KRGNLTPEEQ LVILELHSKW GNRWSKIAQH LPGRTDNEIK NYWRTRVQRQ 120 ARQLKIETNS ARFRDVVRWF LMPKLLQKMP YQSSIQSLNS TPIQLNTPPE SLSFIEQNTV 180 NNPYYSDKSI SEGWSPSICS NSLNITQFPQ ISEFPATPQD FGYIDHSPLL KESYNSYESE 240 AIQLASTATP GFNYPYYDSS MTENPCIDDM ADSLWNMDEI WQLQKLQGRS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25340.1	8e-83	MYB family protein