PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82228.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 240aa MW: 27293.9 Da PI: 7.0469

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.7	2.4e-09	152	198	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 h+++Er RR++iN+++ +L++l+P + K + ++L + + Y++sLq RWR82228.1 152 HSIAERARREKINERMRKLQDLVPGC-----YKmMGMTATLDEIISYVQSLQ 198 9************************8.....354888899999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MDGISDDLQS FEPSLPFLET DSSTGLMLEN PTFNLHGLID FSNDSFFPQQ PEFLVSITDD 60 NLLGFSNSVP LPQSMSSVGD WNQESKMMEL SKSYSGQSPT QVSEIGLKEG GKIIRKNCFG 120 RRRRGRCRGK QVEKPTEVVH VRARRGHATD RHSIAERARR EKINERMRKL QDLVPGCYKM 180 MGMTATLDEI ISYVQSLQNQ IEFLSMKLSA ADSFYNFSLE MEKTERQTTH ALKAQIWGGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18400.1	1e-42	bHLH family protein