PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82307.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 256aa MW: 29192.7 Da PI: 5.455

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142	3.5e-44	6	135	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppG+rF Pt+eelv +yL+ k++ +++el++vi+ vdiy+++Pw+Lp+ ++ ++++w+fFs+r++++a+g r+nr+t sgyWkatg v+s++ RWR82307.1 6 LPPGYRFFPTEEELVGFYLRSKLDMRRVELDHVIPVVDIYSLDPWELPRksgELCIGDEQWFFFSPRQEREANGGRPNRITPSGYWKATGIPGYVFSSD 104 79**************************999***********52454444999************************************ PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127 ++++glk+t+vfy+g+ap+g+kt+W ++ey+ RWR82307.1 105 NRTIGLKRTMVFYQGKAPTGTKTKWKVNEYK 135 ****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MSNPNLPPGY RFFPTEEELV GFYLRSKLDM RRVELDHVIP VVDIYSLDPW ELPRKSGELC 60 IGDEQWFFFS PRQEREANGG RPNRITPSGY WKATGIPGYV FSSDNRTIGL KRTMVFYQGK 120 APTGTKTKWK VNEYKAIEEA TTSAASLKVR HEVNLCRVYV TSGNLRSFDR RPLVAAPREM 180 LDRADDRREA MPNVDSCNNI EDASCRNFGE SAHGNNPSME EHTGFLYSSL KEETSNDLNM 240 INDMDALWNS IVGADY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-71	NAC family protein