PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82366.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 222aa    MW: 24580.5 Da    PI: 7.7533
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-1751101155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+ Vr++  +++Wv+e+r+p   +k+ r++lg+f ++e+Aa+a++ a+++l+g
  RWR82366.1  51 PVYRCVRRRN-NNKWVCEVREP---NKKSRIWLGTFPSPEMAARAYDVAALALRG 101
                 68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDLDLSSSSN DLNPCPSHVQ SNSLSLSRTH VQSSPCKRKA GRKKFRETRH PVYRCVRRRN  60
NNKWVCEVRE PNKKSRIWLG TFPSPEMAAR AYDVAALALR GSSAPLNFPD SEWLLPRAKS  120
SSAEDIRAAA ASVTNVFRPV RKKKSSSSSS CDDLSGAQCS SSISSGVWRS VGGDYVDEDE  180
LFNMPGLIAD MAEGLLISPP LQEEDYDDCR ESHVDLSLWS VD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-41ERF family protein