PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82368.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 192aa    MW: 20600.1 Da    PI: 4.6182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.6e-173282155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr+++  g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  RWR82368.1 32 PVYRGVRRRS-GGKWVSEIREPK----KpNRIWLGSFQTPEMAAVAYDVAALALKG 82
                68*****887.9*********94....468***********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MQYSQSTRKP NSGGSSGGSG TAADRPVPGR HPVYRGVRRR SGGKWVSEIR EPKKPNRIWL  60
GSFQTPEMAA VAYDVAALAL KGSDAELNFP GCAHALPIPA SSSPRDIQAA AAAAAASLPL  120
LGIPQPESYT AVREEPAPVS NVEFVDEDVI FDMPNLLMNM AEGMLLSPPR LDEAEDDDPD  180
QETTCHNLWS YP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-41ERF family protein