PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82648.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 261aa    MW: 29377.2 Da    PI: 4.8523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-1369112654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A+eYI++L
  RWR82648.1  69 IVSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQEL 112
                 467*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MENIGGGVVD EVHEDYNHYW ETKMFLQNEE LFFPNEEIDS WGWDEPISGY YDSSSPDGAA  60
SSSATAKNIV SERNRRKKLN ERLFALRAVV PNISKMDKAS IIKDAIEYIQ ELHNQEKKIQ  120
EEINELERGR QKKLPNPRAQ NEGSSLSTSM KKINDRGYES EGGGGRLSAP IEVLELRVSE  180
VGEKTSVITI TCSKNKDTMV KLCEVFESLK LKIITANITA FPGMLTKTLF VEANEIEKAQ  240
LKEKIEMAIA DIDAPKSPLS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.16e-72bHLH family protein