PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82754.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 331aa MW: 37322.3 Da PI: 6.573

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W++++r g+ R++k+c++rw +yl RWR82754.1 14 RGLWSPEEDEKLINYISTYGHGCWSSVPRLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	53.4	6e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++++++k lG++ W+ Ia++++ gRt++++k++w++ RWR82754.1 67 RGSFSPQEESIIIELHKILGNR-WAQIAKHLP-GRTDNEVKNFWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGHHSCCNKQ KVRRGLWSPE EDEKLINYIS TYGHGCWSSV PRLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEESIIIE LHKILGNRWA QIAKHLPGRT DNEVKNFWNS TIKKKLISRG 120 GVPEITLPRM SNQVASIGGL SPLNANPNPM MNAQDHLLLP SATSMPNDFR CEDLKIDVVN 180 YTSNWISAPP PVESSVYDYT WPIDNLHLDQ HHHHQVDYKC VDMYANETAP SNYNQVKSFD 240 SKFIMPYDPS AISTMPELCE IIEVDESAMP SSSFPSEVDV GACFPFSSYP YDSYVPMNQL 300 DYMNTIMGSS SSSSSLLLCG NFPINPTLPP K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	1e-78	MYB family protein