PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82877.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 388aa    MW: 44060.4 Da    PI: 4.3939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.2e-06202241953
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 Er+RR+r+ + +  Lr l+P+      +K++K ++L  A  Y++s
  RWR82877.1 202 ERNRRKRLSQQLLSLRALVPNI-----TKMDKRSVLVDALAYLRS 241
                 9********************7.....6**************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEMELGPFTV PEVSHMPTHS NTCSADIISS WLDNDDIYTP TFPEQLQNIH FLDNFPQFSL  60
PDFESDPFSL IAQQEEYSLL DHSESQPDPT AGYNQFLTEI PVTAEPMTHS TTLIEEDESD  120
CFLSDDLCAV MPDESYESFF DHIMGLGSTP TTIDSCCVNL QMSPLTNDGE GRNEDDEVEE  180
EEEETDEDRK PVALNCKNLY SERNRRKRLS QQLLSLRALV PNITKMDKRS VLVDALAYLR  240
SIHEETARIQ KELKESSSSF SKFNHNLEPF PNNTTDTLLP SRLFAPPPRR YSKPKSQILE  300
IDTEKIEDRR FVVKITSKGG AGVGGEVLRV IESLGFEITY TALDQIKPMH VLTTVFIRVR  360
KQGRMTEEKL RDCITSTALR SGLILHNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-08bHLH family protein