PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82932.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 366aa    MW: 40299.6 Da    PI: 4.4816
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-102933331055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  RWR82932.1 293 RKRRERINQRLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 333
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MDCVGASSEM NWSAFSGTVS ADETEFLSQL LGSYPFTDDP DSYPSFELPA TFWSGHEAIN  60
MVMCDNDSCY HCLDALESSL INCLPQGNND SLCIPSSDYE NHYIGDANII PAIDSSTSAM  120
DHCMVDERKT SSLLGIIPDN LYEETAYLNE EMNADDLGEP SVNPSEQVLL NQKMQRKRKP  180
RVSEPDKVIE EKANRSQAAK KRTRVKGDVQ RNANSTHSTK TQKVNLTTHE EESSAALNGK  240
GSGGYYSEDD SIGSQEMNGG MSSSSKGSPP LNSNGTTRAS RGSATDPQSL YARKRRERIN  300
QRLRILQNLV PNGTKVDIST MLEEAVQYVK FLQLQINLLS SDDLWMYAPI AYNGKDIGLD  360
LMISAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-54bHLH family protein