PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82937.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 153aa    MW: 15910.2 Da    PI: 10.3206
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.0004184106123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C+k F++   L  H  +H
  RWR82937.1  84 HRCSVCDKAFPSYQALGGHKASH 106
                 79**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MALEALNSPV GPTPPFSSIR EPEFHSLEPS AKRPRSKRPR PTEEEYLALC LIMLARGGAS  60
GAASFASPIR HHEAPPPPTT KNAHRCSVCD KAFPSYQALG GHKASHRKLL PSAEDSAPKA  120
VTSAATMTAG AVASAVPAAS LRLRATPVAG ALT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13741KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-14C2H2 family protein