PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82957.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 261aa    MW: 28817.2 Da    PI: 8.6146
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.4e-2996155159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK  k+++ pr+Y++C+++ +Cpvkkkv+rsa d++++++tYegeH h 
  RWR82957.1  96 VKDGYQWRKYGQKITKDNPSPRAYFKCSTSsDCPVKKKVQRSAGDKSILVVTYEGEHAHA 155
                 58*************************9988***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MSTQQDISDK DKVQALEAQI ERLHKENEEL KNMIGVMTNN YHNLQAHTNS FLTHEVGRPS  60
ESWSSQDSSK KQMKGTLKAK TTQVLVRIDA EGSLIVKDGY QWRKYGQKIT KDNPSPRAYF  120
KCSTSSDCPV KKKVQRSAGD KSILVVTYEG EHAHALCDDP NGSTSRTHGT IIGSVLPGLP  180
CSVPLNPSQS SASLDLTLSR PDGATNRPPQ NNNHHLHQHN NSNTNFLVEY VASLMRDPNF  240
TTALAAEVAQ SIIGSHDQTK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-38WRKY family protein