PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83092.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

YABBY

Protein Properties

Length: 168aa MW: 18780.3 Da PI: 8.2963

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	199.3	1.6e-61	6	157	4	170
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 + +seqvCy+ CnfCn ilavsvPs+ lf +vtvrCGhCt+l svn+a a q l+ ++ ++++ +++ ++s ++v++ ++s RWR83092.1 6 DAASEQVCYMPCNFCNIILAVSVPSSNLFDIVTVRCGHCTNLWSVNMAAALQSLSWQES----KG------PGFTSPDYRIDLA-TSSRCNKVAM-QVS 92 6789****************************************9999998887775....22......2333333332222.2222333333.346 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++e +p ++rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl RWR83092.1 93 ARNNEGIP---AINRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 157 66666666...69***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MSSCIDAASE QVCYMPCNFC NIILAVSVPS SNLFDIVTVR CGHCTNLWSV NMAAALQSLS 60 WQESKGPGFT SPDYRIDLAT SSRCNKVAMQ VSARNNEGIP AINRPPEKRQ RVPSAYNQFI 120 KEEIQRIKAN NPEISHREAF STAAKNWAHF PHIHFGLMLE TNNQAKHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	6e-82	YABBY family protein