PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83100.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 208aa    MW: 23197.5 Da    PI: 9.6149
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-18452153
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a+  +
  RWR83100.1  4 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEDAARAYDEAAVLM 52
                59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MVKKKFRGVR QRHWGSWVSE IRHPLLKRRV WLGTFETAED AARAYDEAAV LMSGRNAKTN  60
FPVARIPVGE AMPSRNNPSS PTGLSAIFRE KLRRRCKVPS PALTCLRLDP EKSDLGVWQK  120
GAGTLSESNW VMRVELEKKC AEVSPTTSWT SALPESSAST SAVGGGMEED ERIALQMIEE  180
LLNRNCPSPT PPENVLDYSK KKEDFSVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.18e-57ERF family protein