PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83154.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 161aa    MW: 18006.1 Da    PI: 8.4196
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer82.35.6e-26958456
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                   ++eCl+NhAa+lG++a+DGCgEf+p+   ++ a +l+CaACgCHRnFHR+ 
   RWR83154.1  9 ELHRECLRNHAARLGSYATDGCGEFIPD---NSIAGGLQCAACGCHRNFHRKL 58
                 5689***********************9...55689***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MESDNNTREL HRECLRNHAA RLGSYATDGC GEFIPDNSIA GGLQCAACGC HRNFHRKLLV  60
ACSAHEEATG NVCQTNSPAA ADSAAKKRFR TKFSAEQKEK MFGFAERIGW RLQKKENGED  120
HEEEIRRFCR EVGVSKQVFK VWMHNHKNSS SSASPPALPN Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-40ZF-HD family protein