PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83239.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 199aa MW: 21155.2 Da PI: 6.6779

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	181.7	6.2e-57	21	116	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdr+lPianvsrimkk lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+++re+ege+ RWR83239.1 21 REQDRLLPIANVSRIMKKGLPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREVEGER 116 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MADSDNESGG QNAGNSEFFA REQDRLLPIA NVSRIMKKGL PANAKISKDA KETVQECVSE 60 FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFEEYVE PLKIYLQRFR EVEGERSAGG 120 SSSRDGGNGN GVNSGNHGVG FDGDGGVYGG SMVGHHHGQM YGSGVVYHHG QMGVAGKSSN 180 LSGAAGHGRQ QGHGTVHHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-65	NF-YB family protein