PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83384.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 224aa MW: 24871.8 Da PI: 6.3968

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	177.2	1.6e-55	58	154	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqdrf+Pianv+rim+kvlP++akis+daket+qecvse+isf+tsea+dkcqre+rkti+++d+lwa+++lGf+dy+epl++yl++yreleg++ RWR83384.1 58 VREQDRFMPIANVIRIMRKVLPTHAKISDDAKETIQECVSEYISFITSEANDKCQREQRKTITAEDVLWAMSKLGFDDYIEPLTAYLHRYRELEGDH 154 69********************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MERGGAFHGY QRFQKPNSGM MSVELNTPQN QTQNQNQTQY GGGGELDSNP DRDGACTVRE 60 QDRFMPIANV IRIMRKVLPT HAKISDDAKE TIQECVSEYI SFITSEANDK CQREQRKTIT 120 AEDVLWAMSK LGFDDYIEPL TAYLHRYREL EGDHRGSLRG EPLPKRAVEV GPVAAMAYGP 180 AAFHMGLHHQ GLFGGGMGAY FRDGSGVNPS QSAMAGYDPF AAYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.1	1e-65	NF-YB family protein