PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83516.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 212aa    MW: 23800 Da    PI: 8.186
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.71.2e-272273257
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                 +kv YkeCl+NhAa++Ggha DGCgEfmp +g+    + l+CaACgCHRnFHR+e 
   RWR83516.1 22 SKVCYKECLRNHAAAMGGHANDGCGEFMPGSGD----SELRCAACGCHRNFHRKEA 73
                 5799*************************9444....58***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MDLSVVPYCH IERSGSGEPA GSKVCYKECL RNHAAAMGGH ANDGCGEFMP GSGDSELRCA  60
ACGCHRNFHR KEAPGCVDLA YVQHSHHHPV VLYGAAGKAG MVGFPAQQHH HLQVIPGVDL  120
RREENRRSET PEEEEQREVG PRKRFRTKFT QEQKEKMQAF AEKLGWRIQK HDDVALQEFC  180
MEVGVKRHVL KVWMHNNKNT LAKKDPPSIS SP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.14e-52ZF-HD family protein