PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83558.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 253aa MW: 28947.3 Da PI: 5.7827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83558.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.6	2e-43	4	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l+pG+rF Pt+eel+ +yL++k+e+++ +l++vi+ diy+++Pw+Lp+ ++++ ++w+fFs+r++++a+g r+nr+t sgyWkatg+ v+s+ RWR83558.1 4 LAPGYRFYPTEEELIGFYLRNKLERRRDDLDRVIPVYDIYSLDPWQLPSisgeLCTGDVEQWFFFSPRQEREAHGGRPNRITPSGYWKATGSPCYVFST 102 579*************************999**********9545654445788*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkkt+vfy+grap g+kt+W ++eyr+ RWR83558.1 103 NNKIIGLKKTMVFYEGRAPLGKKTKWKLNEYRA 135 *****************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MSNLAPGYRF YPTEEELIGF YLRNKLERRR DDLDRVIPVY DIYSLDPWQL PSISGELCTG 60 DVEQWFFFSP RQEREAHGGR PNRITPSGYW KATGSPCYVF STNNKIIGLK KTMVFYEGRA 120 PLGKKTKWKL NEYRALEEAT SSGANPQLRN EFSLCRVYIK SGCVRSFDRR PLIATSEAIT 180 NRKEMSNIDL CNVAGGNSSS ASSSHENLVK EERERPYEGS ASGDHFHPSF EETINDGKMM 240 NDLDNLLESL DWD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	6e-81	NAC family protein