PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83598.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 291aa MW: 32424.2 Da PI: 6.6231

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	107.7	5.8e-34	89	188	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k ltpsdv+k++rlv+pk++ae++ +++e++ +l++ede g++W+++++y+++s++yvltkGW++Fvk+++L++gD+v Fk+ + ++++l+++++r RWR83598.1 89 FEKPLTPSDVGKLNRLVIPKQHAERYfPLESEKGLQLSFEDEAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDIVSFKRLRPNGEQLYIGWRR 187 99***********************777788999********************************************98889999****9 PP S CS B3 99 k 99 + RWR83598.1 188 R 188 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MPIKHLPSEH PESQWCHLST SQFKNILSQP HDQWPMQFYG NPCPAWADTG DNPAMPYELG 60 ATQFKGGRDD NEEDSRSQLV GDGEREPLFE KPLTPSDVGK LNRLVIPKQH AERYFPLESE 120 KGLQLSFEDE AGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLDAGDIVS FKRLRPNGEQ 180 LYIGWRRRAA TLAAQDGCTA PASVAPWAPL YYAGRPPYPV PPHGTCIGGE VDGNSPAPAP 240 ATTKRLRLFG VNLDCPEDGS VQPKDSCGSG LGRTDEIFYQ GIQLNGSSSH A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	2e-61	B3 family protein