PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83636.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

E2F/DP

Protein Properties

Length: 448aa MW: 49209.1 Da PI: 4.5983

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85	5.7e-27	123	188	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a +L +v ++RRiYDi+NVLe+++liekk kn+irwkg RWR83636.1 123 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAGTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 188 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSGGGRAPAS SRSAQPILQP LKRHLPFSTG KPPFVAPDDY HRFSSGSGCG GGEICSLASA 60 DDGSEALVMK SPLKRKSDPE DYEGGSSEWT ASTRYAEVVN CPLSTPVSGK GGSPSGTPVG 120 TCRYDSSLGL LTKKFINLIK HAEDGILDLN KAAGTLEVQK RRIYDITNVL EGIGLIEKKL 180 KNRIRWKGLD VSRPGEIDSD ATILQAEVEN LSMKEQRLDD QIREMQERLR DMSEDENNKR 240 WLYVTEEDIK ALPCFQNETL IAIKAPHGTT LEVPDPDEAV DYPQRRYRIV LRSTMGPIDV 300 YLVSQFEEKF EEMSGVEAPP SLPPASNSRS AETSAVAIVA ESRGKEMELE SHHDAHRMCS 360 DPSASQDFIG GIMKIVPSDL DTEADYWLLS DAEVSITDMW KTDPGDEWDG VDRFNSEFMM 420 GGDVATPRPQ TPPSGVTEVP LSKNSNLR

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSGGGRAPAS SRSAQPILQP LKRHLPFSTG KPPFVAPDDY HRFSSGSGCG GGEICSLASA  60
DDGSEALVMK SPLKRKSDPE DYEGGSSEWT ASTRYAEVVN CPLSTPVSGK GGSPSGTPVG  120
TCRYDSSLGL LTKKFINLIK HAEDGILDLN KAAGTLEVQK RRIYDITNVL EGIGLIEKKL  180
KNRIRWKGLD VSRPGEIDSD ATILQAEVEN LSMKEQRLDD QIREMQERLR DMSEDENNKR  240
WLYVTEEDIK ALPCFQNETL IAIKAPHGTT LEVPDPDEAV DYPQRRYRIV LRSTMGPIDV  300
YLVSQFEEKF EEMSGVEAPP SLPPASNSRS AETSAVAIVA ESRGKEMELE SHHDAHRMCS  360
DPSASQDFIG GIMKIVPSDL DTEADYWLLS DAEVSITDMW KTDPGDEWDG VDRFNSEFMM  420
GGDVATPRPQ TPPSGVTEVP LSKNSNLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-145	E2F/DP family protein