PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83645.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 238aa    MW: 27158.3 Da    PI: 5.0362
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.8e-0555723855
                STCHHHHHHHHHHHHHHH CS
         HLH 38 lsKaeiLekAveYIksLq 55
                 +K++i+ +Av+YIk+Lq
  RWR83645.1 55 ADKSTIVDEAVNYIKNLQ 72
                58***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEGRELLTKG MCWKKKNEKE LDEDDLEEEE EVGLGRSYMQ GLLSLDLEKF GEEMADKSTI  60
VDEAVNYIKN LQTILQKLQK QRLKRMQRSS MISYDASMVV PPTTMSKSRE AYLVDQASFS  120
NWATMNLNDG LLIPCMPQCL QTWSSRNVVL SISGDDAQIS ICIARKPGLL PIVFYILEKY  180
KIHVITASIS SDHFKSMLMI HTRASGVFDQ YPEMALAVEE KYKHAVGEMI DCLSSEWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.16e-16bHLH family protein