PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83646.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 125aa MW: 13869.4 Da PI: 10.0688

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.6	4e-07	85	112	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 4 ahnerErrRRdriNsafeeLrellPk.a 30 +h Er RR++++s f++L llPk + RWR83646.1 85 THIWTERERRKKMRSMFSNLHALLPKlP 112 67778*********************44 PP

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence
MAEGGQGGRG HNNQPREIQL REVSNSEDNG GGDNKKSAKK PTESRPYSPP AGLQVGVKRD 60 QNGVLKKSNG NGGKESKDGE QEYETHIWTE RERRKKMRSM FSNLHALLPK LPPKVNEMDD 120 ALPFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	2e-17	bHLH family protein