PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83765.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

ARR-B

Protein Properties

Length: 585aa MW: 66037 Da PI: 5.123

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	80.1	2.6e-25	194	247	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+++ G +k Pk+il+lm+++gLt+e+v+SHLQkYRl RWR83765.1 194 KARVVWSVDLHQKFVNAVNHI-GFDKVGPKKILDLMNIPGLTRENVASHLQKYRL 247 68*****************.9*****************************8 PP
2	Myb_DNA-binding	37.9	4.2e-12	196	246	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+ G + +k+I m+ g+t++++ s++qky+ RWR83765.1 196 RVVWSVDLHQKFVNAVNHIGFDkvGPKKILDLMNiPGLTRENVASHLQKYR 246 678***********************************************7 PP
3	Response_reg	81.7	2.3e-27	10	118	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ ++l+++l+k y ev+++ ++++al++l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga RWR83765.1 10 VLVVDDDPTWIKILEKMLKKCSY-EVTTCCKATDALNMLRERKdrFDIVISDVYMPDMDGFKLLEQVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 104 89*******************.***********888778******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ RWR83765.1 105 DYLLKPIRMKELRN 118 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MDGFPAGLRV LVVDDDPTWI KILEKMLKKC SYEVTTCCKA TDALNMLRER KDRFDIVISD 60 VYMPDMDGFK LLEQVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP IRMKELRNIW 120 QHVYRKKINE VKEIESQDHE SNEGTQITRR GLNDFEYDLL LCGSDLNSTK KRKELGNEEH 180 GDQDFSNNAS ALKKARVVWS VDLHQKFVNA VNHIGFDKVG PKKILDLMNI PGLTRENVAS 240 HLQKYRLYLS RLQRQSESNT AFCGIKQSDF SSKDHPGKFG LQSSTITQHN SPNSFGYSSK 300 ISIVQDAVPE IPEDELKNMV SFLPITDAKN SIKDDVPVAQ KFNTVPQQGV VLPFGGMVSD 360 DCTSFESTRS QQQSWSEESP VVQLMHHLKQ DHELHLPLKG CPHPPLHGQQ HHFQVDPVQT 420 AASANSRTGS SQKAGHSEIN PLYAENENNH VRISSPIACG IDTFPSQLEQ NIVNQQRFGE 480 IPVSSATSST KNQDLDRNCT NNWEYSQSLT SKSRSSSISS EDNLPLISLQ SYGSFEDVPL 540 DNVDLFYLSD SSTITDLQSY VYDGLRFDYD DQCDSMEYPI TEDMF

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MDGFPAGLRV LVVDDDPTWI KILEKMLKKC SYEVTTCCKA TDALNMLRER KDRFDIVISD  60
VYMPDMDGFK LLEQVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP IRMKELRNIW  120
QHVYRKKINE VKEIESQDHE SNEGTQITRR GLNDFEYDLL LCGSDLNSTK KRKELGNEEH  180
GDQDFSNNAS ALKKARVVWS VDLHQKFVNA VNHIGFDKVG PKKILDLMNI PGLTRENVAS  240
HLQKYRLYLS RLQRQSESNT AFCGIKQSDF SSKDHPGKFG LQSSTITQHN SPNSFGYSSK  300
ISIVQDAVPE IPEDELKNMV SFLPITDAKN SIKDDVPVAQ KFNTVPQQGV VLPFGGMVSD  360
DCTSFESTRS QQQSWSEESP VVQLMHHLKQ DHELHLPLKG CPHPPLHGQQ HHFQVDPVQT  420
AASANSRTGS SQKAGHSEIN PLYAENENNH VRISSPIACG IDTFPSQLEQ NIVNQQRFGE  480
IPVSSATSST KNQDLDRNCT NNWEYSQSLT SKSRSSSISS EDNLPLISLQ SYGSFEDVPL  540
DNVDLFYLSD SSTITDLQSY VYDGLRFDYD DQCDSMEYPI TEDMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-116	ARR-B family protein