PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83856.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 139aa    MW: 15607.2 Da    PI: 10.2544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171e-053678855
                HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  r R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  RWR83856.1 36 SMRERKEKLGEKIAALQQLVSPF-----GKTDTASVLLEAMGYIKFLQ 78
                5688999**************98.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MMVGTMTELK RRHESLDHSS GICNTVKRHK TQGSISMRER KEKLGEKIAA LQQLVSPFGK  60
TDTASVLLEA MGYIKFLQEQ VQVLSAPYLQ SAPSGKLQES EYYSLQRRGL CLVPITWTIK  120
VVRSNGADIW APVMKNTPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.34e-53bHLH family protein