PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83952.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HB-other
Protein Properties Length: 161aa    MW: 18557.2 Da    PI: 8.4878
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.87.6e-1892146353
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRa 53 
                 k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR+
  RWR83952.1  92 KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpllsNIEPKQIKVWFQNRRQ 146
                 5679**************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MQNDDSDSVR GEKGDLSLKT EEKLVFERQN RVQNRNILPE ACGEFHISDK QRSLDLFLAA  60
FWAEEMAMAI VPRRESGSSS SGGMNKHLDP GKYVRYTAEQ VEALERVYAE CPKPSSLRRQ  120
QLIRECPLLS NIEPKQIKVW FQNRRQGFVG MGLRLFIVHV F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.11e-34HD-ZIP family protein