PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84072.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 330aa MW: 37297.1 Da PI: 6.3464

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.5	1.8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G g+W++ ++ g++R++k+c++rw +yl RWR84072.1 14 KGPWTPEEDKILVQYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	58.3	1.8e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ +lG++ W++Ia +++ gRt++++k++w+++l RWR84072.1 67 RGKFTPEEEQTILNLHSMLGNK-WSAIATHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MGRSPCCDEN GLKKGPWTPE EDKILVQYIQ KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TPEEEQTILN LHSMLGNKWS AIATHLPGRT DNEIKNFWNT HLKKKLIQMG 120 IDPMTHRPRT DVFAALPQLI ALANLKEVMD NQPWEDHAVR LQEAMQLAKY QYMQYLLQSA 180 AAMTGNSGHS PSSIGDVDYT HLFNPMTSPK EPLGLNPYSQ VENATLCSLE VAASQQMNEQ 240 QIPYTPSQDP QFPHQENYQS LMSNEMKQDS NFSLFGQGDY KPKSPLPPPP PLVREDSISN 300 PGDACSTSSY EESGPTFWSE LFLGDDPFFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-110	MYB family protein