PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84101.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 327aa MW: 36539 Da PI: 4.6554

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5.1e-13	132	183	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P + + ++ + a+i+ A++++k+L+ RWR84101.1 132 QRMTHIVVERNRRKQMNQYLAVLRSLMPAS---YVQRGDQASIVGGAINFVKELE 183 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MALDAMVVAQ ELFGYGCSKD IYSLAAEAFS CDDFKIEEEE EKGLMAGCEL SSLLEEHQNR 60 ETGLDSVYAN WDSSSSSILQ YAKEWEANSS PEACTDGLFT GTYPPEAAAT PTGRRKRRRA 120 RSCKNMEEVE NQRMTHIVVE RNRRKQMNQY LAVLRSLMPA SYVQRGDQAS IVGGAINFVK 180 ELEQLLQSLE AQKQMTQQSE AGFSSPFADF FSFPQYSCST NRNRNSTNDT VVENHSAIAD 240 IEVTMVESHA NLKVLSRRRP KQLLKMVAGF QSLDLTVLHL NVTTIDDMVL YTFSTKVEEN 300 CALASVDEIA AAVNQMLGRI QEEASMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	119	RKRRR
2	133	144	RMTHIVVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	9e-70	bHLH family protein