PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84150.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 219aa MW: 25060.4 Da PI: 10.1726

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.7	5.7e-15	135	214	9	99
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++l lp++f+e+h + + + t+tl d++ +++ ++ r+k+ +++GWk+F a++L +gD +vF+l++ + f v ++r+ RWR84150.1 135 HG---SWLGLPREFCESHL-P-KDDATITLIDQTEDEYQTRYLARNKG----FGAGWKDFSIAHELVDGDALVFQLIKATMF--EVYIIRS 214 33...4688*******4.2.25679***********777777....9*********************997777..7777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MEKGQLQYEE IRRKRLEENK KKLEDLNLTH LLHSLRNASS KPTHAKKGKP RPRPVRGNEA 60 NVEVRRSSRV ANLPSPDYTG ANVYYGRGTR TRRSYKRKSL LSDKVMSGAV KIATEFQSSL 120 DPEFPSFVKP FLQSHGSWLG LPREFCESHL PKDDATITLI DQTEDEYQTR YLARNKGFGA 180 GWKDFSIAHE LVDGDALVFQ LIKATMFEVY IIRSSESSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	12	49	RRKRLEENKKKLEDLNLTHLLHSLRNASSKPTHAKKGK
2	92	98	RRSYKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	8e-41	B3 family protein