PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84164.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 252aa    MW: 26788.8 Da    PI: 6.5086
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-183484155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  RWR84164.1 34 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 84
                59*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MVKSSNVLSG QGNVADDEVQ EPSVVAKSMA SRKKKYKGVR MRSWGSWVSE IRAPNQKTRI  60
WLGSYSTPEA AARAYDAALL CLKGSSANLN FPIHPATHIP TTLMSPKSIQ RLAAAAAHAT  120
TPSSLSSSSS SSSSPNITPV SSSPAPSPAS PSSPSSSSSS PYTPSTSSLS PSPSSPSSPM  180
DYQGELFTSS EANHTSFLME EHPHFIDPWI DFGGSLSPKY VDQMLNACSL FAPPPALEEF  240
DEEGDIRLWS FC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.18e-31ERF family protein