PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84189.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 225aa MW: 25526.8 Da PI: 6.347

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.7	1.2e-09	131	172	8	54
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rrRR+ri +++ L++l+P +K++ a++L +A++Y+k L RWR84189.1 131 AARRRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYMKFL 172 569****************87.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MDISNHTSTT STWVMTIENQ HLLDHLPSEL VYSMEENPFQ IHHTPSSYTG QVSNPLIQTQ 60 KIPPSGHVPN TSCLLEQRRN KEVEEEEDGL GDIKEMIYKI AAMQPVDIDP ATIQKPKRRN 120 VRISDDPQSV AARRRRERIS ERIRILQRLV PGGTKMDTAS MLDEAIRYMK FLKRQVHELQ 180 THQHSPPIDV VSQLEAVDLG SSSSMAPPQG ASFNFARDEC HEGLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	136	KRRNVRISDDPQSVAARRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09750.1	4e-41	bHLH family protein