PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84449.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 945aa MW: 104564 Da PI: 7.3019

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.4e-18	368	468	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l+++ RWR84449.1 368 FEKMLSASDAGRIGRLVLPKKCAEAYfpAISQPEGLPLKVQDAKGKDWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRID-PEGKLLMG 464 89************************666667778***********99899999999.*******************987.88888888 PP EE-S CS B3 96 vfrk 99 ++++ RWR84449.1 465 FRKA 468 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MVVKFRFKNS AYEEVRFCET FHSEASGWRN CESCGKRVHC GCIASMHAFT LLDMGGVECM 60 TCARKNFITV PNQIWPSSTL PPLPLPERLK DISAKNWSQS TGSNSIPGQW WQAQSSWNSA 120 VNQSDLHPRM PYEVDRLNSV DSRLISGEHP TSALENKTVK DPLERITSGS LKLAVPEGLA 180 NGNVNVDSLT SLNAFHKERN IDGLQDTGHL TGDNDPRDAR KGVTADPLRR SVARMSFETL 240 PSSCLNISLQ STSKDDSSLF NSASFSSPNE KSDPTRVSGT MSQRQMPPPP LAKQLFPNPQ 300 NVVDTPGELQ AQMRCGRPRG DGQKRGQVLP RYWPRISDQE LQQMSGEYPL LIIVFFYVIS 360 NSVITPLFEK MLSASDAGRI GRLVLPKKCA EAYFPAISQP EGLPLKVQDA KGKDWLFQFR 420 FWPNNNSRMY VLEGVTPCIQ SMQLQAGDIV TFSRIDPEGK LLMGFRKASS VPSEQDVQAF 480 KTGNGFSTSG EVSNKITKLG EPGSTPTPRP YKGDTESTNL SSVNQVNPND SAHTWSKFEK 540 SGGISKDGPG AKSSLCKKKS SLGSKNKRLR ITHEDSLDLK LTWEEAQDIL RPPPNNAPNI 600 VVIEGYEFEE YKEAPVLGKP TLFTVNHAGE KHQWTQCEDC SKWRKLPLDA LLPSRWTCSD 660 NLWDLQRSSC SSAQELTTEQ LEQLGCSNRA SSKRTRAKEE IDTVEASEGL DTLANLAILG 720 EGDALNSATQ PTTKHPRHRP GCSCIVCIQP PSGKGPKHKQ TCTCNVCLTV KRRFRTLMLR 780 REKRQSEKEA ESARKKQELQ PSVKPEIETE ELASNHSNDD GPNLNTLASD GVCDDPSRRK 840 SSSSPFKGHI DLNIQPEREE EPSPVSDSGS MMRLLRDARE FYPKEQRLEN LVINRELTID 900 HMETIGGAGG QRLDTEPPGA TQPDVDVDHL VPVSMSLLAS TSGTG

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MVVKFRFKNS AYEEVRFCET FHSEASGWRN CESCGKRVHC GCIASMHAFT LLDMGGVECM  60
TCARKNFITV PNQIWPSSTL PPLPLPERLK DISAKNWSQS TGSNSIPGQW WQAQSSWNSA  120
VNQSDLHPRM PYEVDRLNSV DSRLISGEHP TSALENKTVK DPLERITSGS LKLAVPEGLA  180
NGNVNVDSLT SLNAFHKERN IDGLQDTGHL TGDNDPRDAR KGVTADPLRR SVARMSFETL  240
PSSCLNISLQ STSKDDSSLF NSASFSSPNE KSDPTRVSGT MSQRQMPPPP LAKQLFPNPQ  300
NVVDTPGELQ AQMRCGRPRG DGQKRGQVLP RYWPRISDQE LQQMSGEYPL LIIVFFYVIS  360
NSVITPLFEK MLSASDAGRI GRLVLPKKCA EAYFPAISQP EGLPLKVQDA KGKDWLFQFR  420
FWPNNNSRMY VLEGVTPCIQ SMQLQAGDIV TFSRIDPEGK LLMGFRKASS VPSEQDVQAF  480
KTGNGFSTSG EVSNKITKLG EPGSTPTPRP YKGDTESTNL SSVNQVNPND SAHTWSKFEK  540
SGGISKDGPG AKSSLCKKKS SLGSKNKRLR ITHEDSLDLK LTWEEAQDIL RPPPNNAPNI  600
VVIEGYEFEE YKEAPVLGKP TLFTVNHAGE KHQWTQCEDC SKWRKLPLDA LLPSRWTCSD  660
NLWDLQRSSC SSAQELTTEQ LEQLGCSNRA SSKRTRAKEE IDTVEASEGL DTLANLAILG  720
EGDALNSATQ PTTKHPRHRP GCSCIVCIQP PSGKGPKHKQ TCTCNVCLTV KRRFRTLMLR  780
REKRQSEKEA ESARKKQELQ PSVKPEIETE ELASNHSNDD GPNLNTLASD GVCDDPSRRK  840
SSSSPFKGHI DLNIQPEREE EPSPVSDSGS MMRLLRDARE FYPKEQRLEN LVINRELTID  900
HMETIGGAGG QRLDTEPPGA TQPDVDVDHL VPVSMSLLAS TSGTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	771	784	KRRFRTLMLRREKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-152	B3 family protein