PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84496.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 200aa MW: 23321.6 Da PI: 8.5935

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.9	2.3e-20	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++ RWR84496.1 6 STRWCPTPEQLMILEEMYRGgIRTPNASQIQQITAHLsfygRIEGKNVFYWFQNHKARDRQ 66 58***************99***********************************996 PP
2	Wus_type_Homeobox	120.8	5.8e-39	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 a+tRW+PtpeQ++iLee+y+ G+rtPn+++iq+ita+L+ yG+ie+kNVfyWFQN+kaR+rqk RWR84496.1 5 ASTRWCPTPEQLMILEEMYRGGIRTPNASQIQQITAHLSFYGRIEGKNVFYWFQNHKARDRQK 67 589***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MPQVASTRWC PTPEQLMILE EMYRGGIRTP NASQIQQITA HLSFYGRIEG KNVFYWFQNH 60 KARDRQKLRR RLIRQQQHQQ NQQQPPQQQM EDSAAAIRLP NENPPQFLHQ GALEDTTNQV 120 NFTCQTNIWK KEGMEMEMRN PAMAYGQDWV VMMDVCPTNC CRPLKTLELF PIKSTGLKEE 180 FKPSKPFPCS TSTNYNGLSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	4e-37	WOX family protein