PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84650.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 210aa    MW: 23500.6 Da    PI: 5.7391
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28e-104892451
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  A + +
  RWR84650.1 48 SKACREKMRRDRLNDRFVELGSVLHPG---RPPKSDKAMILSDAARML 92
                6789**********************8...89***********98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
METNLNPDFD WIDQVGGGSD SGFRWSLDDL GDLPNAWARD ESVLAPKSKA CREKMRRDRL  60
NDRFVELGSV LHPGRPPKSD KAMILSDAAR MLVELRSEAQ QLKEENENLQ QTIKELKAEK  120
NELREEKTKL KADKERLEQQ LKAITMPPPA YMPHLAPFHA SAVASFASPG QAAANKTTLF  180
PVYPGVAMWQ WVPPADVDTS QDHKLQSPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.17e-59bHLH family protein