PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84653.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 230aa    MW: 25646.9 Da    PI: 5.7241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-0968112451
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 
                 ++  rE+ RR+r+N++f eL ++l +    + +K +Ka+iL  A + +
  RWR84653.1  68 SKACREKMRRERLNDRFVELGSVLHPG---KPPKSDKAMILSDAARML 112
                 6789**********************9...99***********98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
METNLNSDFD WIDQVGGSDS DFRWSLDGLG DLPNACVEIG GTHNDAGDLE RSNSRKRARD  60
ESVLAPKSKA CREKMRRERL NDRFVELGSV LHPGKPPKSD KAMILSDAAR MLVELRSEAQ  120
QLKEENENLL ETIKELKAEK NELREEKTKL KADKERLEQQ LKAITMPPPA YMPHLAPFHA  180
SAVASFASQG QAAANKTTLF PVYPGVAMWQ WVPPADVDTS QDHKLQSPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-62bHLH family protein