PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84715.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 128aa    MW: 15138.1 Da    PI: 6.7913
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.4e-103674646
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     ++E++ + +++++lG + W++I+ +++ +Rt++++  +w+k
       RWR84715.1 36 PDEEDMICRLHRLLGDR-WELISGRIP-NRTAEEVERYWRK 74
                     79*************99.*********.***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MEPVHDSGRN NSIQDGVESI VGENHCEKEK WHDMLPDEED MICRLHRLLG DRWELISGRI  60
PNRTAEEVER YWRKKESKML ENKFAKRHYR VFQGEKTTCP GFWTEPGTAS RALSKERHSS  120
EVRVMIEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.13e-16MYB_related family protein