PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84889.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 251aa    MW: 28319 Da    PI: 9.3388
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-09116186355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC.....................TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkas..................kapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er+RR+++ ++f  L  ++P +                   + +    +Ka++L  A++Y+k+Lq
  RWR84889.1 116 QDHIIAERKRREKLSQRFIALSAIVPGLKkviflfflptinliffssRFYEYVWDKASVLGDAIKYVKQLQ 186
                 5699***********************877***************97666666*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEASQQGADR PMKQHRTNSW NSCTTEHVST PDASPPNLLS FGNQNSPTNQ QQFYSNLIAG  60
AAAKPKDESL SPRTSNIPTD ILISQSSFFK PRLRVQGWSG AKRVNMGTAR PPSHTQDHII  120
AERKRREKLS QRFIALSAIV PGLKKVIFLF FLPTINLIFF SSRFYEYVWD KASVLGDAIK  180
YVKQLQDKVK TMEEQTLKKT VESVVFIKKS QLCGDDDLSS SDENFDGHSD EPLPEIEARV  240
SEKEHSYKSP L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122127ERKRRE
2123128RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-34bHLH family protein