PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84894.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YC
Protein Properties Length: 94aa    MW: 10904.5 Da    PI: 7.056
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC58.81.2e-182472772
       NF-YC 27 kkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrr 72
                k i+ka +dv+ isaeaP+l+++acelfil+ t+ swlha+enk r
  RWR84894.1  2 KSIMKAYKDVRLISAEAPTLFANACELFILKRTIWSWLHAKENKSR 47
                89****************************************9965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MKSIMKAYKD VRLISAEAPT LFANACELFI LKRTIWSWLH AKENKSRIDP AEERHCSSHH  60
LDIHFLISWW TLSRDEIEDE GRVVPVVPSS GVPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.19e-21NF-YC family protein