PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85215.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 232aa MW: 26244.3 Da PI: 4.6618

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.1	1.1e-42	4	136	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lppGfrF Pt+eelv +yL++k+egk+ le+vi+ vdi++++Pw+Lp+ ++ ++++ew+fFs+r++++a+g r+nr+t sgyWkatg+ ++s+ RWR85215.1 4 LPPGFRFFPTEEELVGFYLRNKLEGKREGLERVIPIVDIFSLDPWELPSisgELCTGDEEWFFFSPRQEREARGGRPNRITPSGYWKATGTPSYIFSSt 102 79***********************999999***********54565666999*********************************998 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++++glk+++vfy g+ap+g+kt+W ++ey+ RWR85215.1 103 ttDSHKIGLKRSMVFYVGKAPTGNKTKWKVNEYK 136 888889*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MSSLPPGFRF FPTEEELVGF YLRNKLEGKR EGLERVIPIV DIFSLDPWEL PSISGELCTG 60 DEEWFFFSPR QEREARGGRP NRITPSGYWK ATGTPSYIFS STTTDSHKIG LKRSMVFYVG 120 KAPTGNKTKW KVNEYKAYEE ASTSSAAPKV RDEMSLCRVY VTSGTLRSFD RRPLVSGTGE 180 MLQREETSRA ITDGTSMEEQ GTSMNPSLAE DADPELNTMD ELDALWNSFN WD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	8e-76	NAC family protein