PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85285.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 403aa    MW: 43489.7 Da    PI: 7.2365
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.5e-20182231255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g
  RWR85285.1 182 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 231
                 7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MCMKVASQRE SAGFLRHPYG GEAGEEEDEG AATPVTMMMP FAGYSRTREM SAMVSALRRV  60
VAGEGPSTMM GTTTTGGECG GSASSPSSSF SSSSWGGGGG SSRSGQKRAR EEETAGQLQE  120
SVSRFYSGGY GDFQTNQRDS STQVPVAEEG RSILTTSPAK VTTAPRREDC SSTHVGEERK  180
RRYRGVRQRP WGKWAAEIRD PHKAARVWLG TFETAEAAAR AYDEAALRFR GNRAKLNFPE  240
NVRIRPPLQV SPETHFTVAP VPPPATLLPA SQMAHPFLQS QPQTQQSSDL WRDYAQYSHL  300
LQSTVDFQRD QPTSLLDQLF LSSSSSSSSS PSPFTSFASA SASASSSYPS PSPFPLFYST  360
DTTTDHQTGC YFRPPENRGP AGGSDTLPPS WTDSGHFPPS SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.18e-29ERF family protein