PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85397.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 128aa    MW: 14409.3 Da    PI: 10.0216
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.33.2e-2349106259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg++W+KYGqK +k ++  rsY++C  ++C++kk v+ +++dp+++ ++Y+g+H+h+
  RWR85397.1  49 EDGHSWKKYGQKFIKHTKGNRSYFKCQKTKCRAKKTVDWCSSDPSYLRVIYQGRHDHP 106
                 7********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MNWSCVRIGP VVLLRETGGE LFREGKIGPS EEQAEPKKIG SGANQLIPED GHSWKKYGQK  60
FIKHTKGNRS YFKCQKTKCR AKKTVDWCSS DPSYLRVIYQ GRHDHPSSGP HSSSTVNQYN  120
LVSQVFGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.12e-14WRKY family protein