PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85586.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 224aa MW: 25836.1 Da PI: 6.4243

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd++l d+v +G g+W++Ia+t ++R +k+c++rw +yl RWR85586.1 9 KGLWTVEEDKILTDYVGIHGEGRWSRIAKTTSLKRNGKSCRLRWMNYL 56 678***************************99**********97 PP
2	Myb_DNA-binding	59.2	9e-19	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r ++++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w+++l RWR85586.1 62 RESFSEEEEDLIIRLHTLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 678*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MMEGDHYKKG LWTVEEDKIL TDYVGIHGEG RWSRIAKTTS LKRNGKSCRL RWMNYLSPNV 60 KRESFSEEEE DLIIRLHTLL GNRWSLIAGR VPGRTDNQVK NHWNTHLKKK LGIVKAKSNE 120 SNSSLKHTHK DDEMGEDPMP LRDLPSKRPR CSKDSGIVET DQGEDGSFQD TNTMDSNSQV 180 HLMSEYLFSP LWVSNDDLFP STPTLMELMD GDIGNPLDMF WHQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-67	MYB family protein