PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85594.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 174aa    MW: 19837.9 Da    PI: 9.1617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-101359654
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                + +Er+RR ++++  ++L +llP+     + + ls  + L +A  YIk+L
  RWR85594.1 13 KTVERNRRMHMKTLCFKLASLLPShY---TREALSQQDQLDQAAAYIKKL 59
                789*********************55...7777***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MKSSRASSKL ERKTVERNRR MHMKTLCFKL ASLLPSHYTR EALSQQDQLD QAAAYIKKLR  60
ENIEGLKERR ALAAHIVGIN KDMSDGMMIE FRTPVIEVKD LGSTVEVVLI SGLNRNFMFC  120
DVISVLEEEG AEVVNASFSQ VANKIFHIIH SQVTSSRVGF ESERVYERLK ELVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-28bHLH family protein