PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85602.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 154aa    MW: 17447.8 Da    PI: 4.517
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB73.92.5e-231195387
       NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87
                ++d  lP a + +i++++lP + ++++da++++ ec +efi +++se+++ c++e+++ti+++ ++ al  lGf +y+e++++  
  RWR85602.1 11 KEDVSLPKATMLKIIREMLPPDVRVARDAQDLLVECCVEFINLISSESNEVCNKEEKRTIAPEHVIKALEVLGFGEYIEEVHAAY 95
                68999**************************************************************************998654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MEPMDIVGKS KEDVSLPKAT MLKIIREMLP PDVRVARDAQ DLLVECCVEF INLISSESNE  60
VCNKEEKRTI APEHVIKALE VLGFGEYIEE VHAAYEQHKL ETLQDSPRGG KWTAVEMTEE  120
EALAEQQRMF AEARARMNGT SIPRRSDSDR SIES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.25e-87NF-YB family protein