PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85624.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 279aa    MW: 30705.8 Da    PI: 7.5719
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.42.4e-16187236151
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                 k+r+rW   LH++Fv+ ++q+ G++ ++Pk+i++ ++  gL l++v+SHLQ
  RWR85624.1 187 KERIRWDAVLHNNFVKSIDQI-GIDSTVPKKIVQSIDASGLNLKNVASHLQ 236
                 68*******************.***************************** PP
2Response_reg33.32.5e-121210722109
                   TCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHT.....TTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  22 gyeevaeaddgeealellkekd..pDlillDiempgmdGlellkei.reee.....pklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                   g+ ev++++++ +al +l+e+   +D+i+ D+  p+m+G+ellk   +e +     ++    v++a+ + + a + l+  a+ +l Kp++  el +
    RWR85624.1  12 GMGEVTTCTHPAAALSILRERIgcYDVIIADVYKPNMKGFELLKIFcQEMHlplfiSNSFFSVMSANCDVDVAMRGLENEARYHLKKPVSVGELKN 107
                   6789****************9999**********************5555588888888889****************************999976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEARGEGGGP FGMGEVTTCT HPAAALSILR ERIGCYDVII ADVYKPNMKG FELLKIFCQE  60
MHLPLFISNS FFSVMSANCD VDVAMRGLEN EARYHLKKPV SVGELKNIWQ PIIRKSIENE  120
NDIEEIGPFG EIRQTGCSSE ENDNPDAAAG WVSSVDHVEL ERHKRKKGAL GVRIDAKGKK  180
VNTAERKERI RWDAVLHNNF VKSIDQIGID STVPKKIVQS IDASGLNLKN VASHLQVSPF  240
QVKAQDVSSA ANGWRPGPNK HSKLPITLQS NGSTTNSSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-34ARR-B family protein