PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85732.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 312aa    MW: 35009.3 Da    PI: 9.3417
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.11.1e-1827110276
    trihelix   2 WtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                 Wt +e+l+Li+a++ ++er  +++          ++ +W++v +++++ g+ rs++qC++kw+nl ++ykk++++ekk +++++
  RWR85732.1  27 WTLNETLVLIKAKKMDDERRMKKEsggegrstrPAELRWKWVEDYCWRNGCMRSQNQCNDKWDNLMRDYKKVRDHEKKVEAGTQ 110
                 *************9777766654334555555599******************************************9754443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MADQSSALMV VGGAEGESVR EYRKGNWTLN ETLVLIKAKK MDDERRMKKE SGGEGRSTRP  60
AELRWKWVED YCWRNGCMRS QNQCNDKWDN LMRDYKKVRD HEKKVEAGTQ EGSYWKLERH  120
ERKDKNLPTN LLPEIYEALV EVVDRRGTQR VRLHGPDPSK GGFDPLEKTI SSFPSSLPSL  180
LHHSSHPAPS QPPPQPAQSL PSLDSDGSEF SNSPAKRRRK RGEGSSNTSS AHELSSAISE  240
SASILSKALL QCEEKEDRRH KELINVEERK LKIEELKTGI SSQAINGLTA AVNKLATSIL  300
ALASDRNPSA PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-56Trihelix family protein