PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85738.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family LBD
Protein Properties Length: 170aa    MW: 18745.4 Da    PI: 8.2194
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260147.92.7e-46161151100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+Ca+dC++apyfpa++p+kfanvhk+FGasnv k+l++lp ++r+da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+a+la++++
  RWR85738.1  16 PCAACKLLRRRCAQDCIFAPYFPADEPQKFANVHKVFGASNVNKMLQELPMHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQAQLAVAQA 114
                 7**********************************************************************************************9997 PP

      DUF260 100 e 100
                 e
  RWR85738.1 115 E 115
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MYIMRETSRK QGMSSPCAAC KLLRRRCAQD CIFAPYFPAD EPQKFANVHK VFGASNVNKM  60
LQELPMHQRS DAVSSMVYEA NARVRDPVYG CVGAISSLQQ QIDALQAQLA VAQAEVVHMR  120
MHQAASFPSI TGNYVEGGSP SSKLTTPHTR SLFAVDMVVD QTNMGDSLWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.18e-69LBD family protein