PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85768.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 291aa    MW: 32446.6 Da    PI: 4.2938
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.64.5e-08166211555
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +++ r+RR+ri ++ +eL +l+P  +      K++ ae+L+   +Y+k+Lq
  RWR85768.1 166 QSMAARQRRKRISEKTQELGRLIPGgN------KMNTAEMLQAGFQYVKYLQ 211
                 56888*******************955......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MALSYCPSWE AFQQLDTEMA AFQHAQSDIA TELLCFCDDC GVCVQDTLVD PFFEPEDFSY  60
LDNNTHLLPY LNAPEPITSF PNDLYPVDEW ECYQYPKRAR NCGEFYAPDF IYGYSDGSNA  120
AATCPAPEFL PEFSFSPVEA QLPMTGFSPG NSESSKKSNG GCLSAQSMAA RQRRKRISEK  180
TQELGRLIPG GNKMNTAEML QAGFQYVKYL QAQVGILELM GSLQQEAKEG AQLAHVEELR  240
VLASPKIQEK LYIEEKCVVP RELVEALAKD PELRSNSSIS KDLDLLIKTL G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.13e-31bHLH family protein