PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86032.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 149aa    MW: 16921.2 Da    PI: 9.0801
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.00153860123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C  C++ Fs+   L  H  +H
  RWR86032.1 38 FECRTCNRQFSSFQALGGHRASH 60
                89**********99999998887 PP
2zf-C2H211.20.001181103123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++Cg  Fs    L  H+r+H
  RWR86032.1  81 HECSICGLEFSIGQALGGHMRRH 103
                 78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MMKRFRDEDV EGIHVANWLM LLSRGQHEPV AQTSGRVFEC RTCNRQFSSF QALGGHRASH  60
KKPRTVEDCD RRVQSSKPRV HECSICGLEF SIGQALGGHM RRHRNEIEGN YNEMVAVKKL  120
NGGRGFFLDL NLPPSENEVG YAGKIPFVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.15e-33C2H2 family protein